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Welcome to the RHPC and Xtal wiki. This is a place we should upload [[computational protocols]], [[experimental protocols]], (...or anything you wish to add here as a Wiki hyper link).  
Welcome to the Research High Performance Computing (RHPC), Computational Cancer Biology and Xtal wiki.  


==Policy==
The very ideas of Wiki are based on collaboration and responsibility. If we all follow these basic principles - upload as much information as we can and be as confident as possible it is accurate - it will go well.


===RHPC Wiki===
===RHPC Wiki===


Here you can find information about the Research High Performance Computing, both as a user or as a member of the user committee (UC).
The RHPC facility provides NKI research groups with group-oriented high-performance computing resources and long-term data storage — compute servers for CPU/GPU-heavy workloads, managed storage, and support for running compute jobs and scientific software.
Have a look at the [[HOWTOs|Documentation]] page for detailed instructions on how to use the RHPC Facility.


===Xtal Wiki===
'''Getting started:'''
* '''Get an account''' — email rhpc-admin@nki.nl
* '''Connect''' — [[Connecting via terminal|via terminal]], or in your browser with a [[Web services (RStudio and Jupyterhub)|web service]] (RStudio/Jupyterhub)


This is the place to upload things related to the Department of Biochemistry. Please do edit protocols when its needed, but also keep in mind that even if that can be done electronically without consulting the original author, we are still a small group and we can talk to each other easily.
See [[RHPC computing]] for more about the facility itself, or the [[HOWTOs|full documentation]] for everything else — storage, compute jobs, software, and more.
 
===Computational Cancer Biology (B7)===
 
Pages written for the CCB group, but it also contain pointers useful for other research groups, specifically on data management and reproducibility.


==Hints==
==Hints==
* This will be the wiki for [[RHPC computing]] at the NKI
* This will be the wiki for [[RHPC computing]] at the NKI


* To get an account contact Ismail or Torben.
* To get an account, email rhpc-admin@nki.nl


* Please do take as much care as possible to cross-reference articles as the resource is growing!
* Please do take as much care as possible to cross-reference articles as the resource is growing!

Latest revision as of 10:28, 23 June 2026

Welcome to the Research High Performance Computing (RHPC), Computational Cancer Biology and Xtal wiki.


RHPC Wiki

The RHPC facility provides NKI research groups with group-oriented high-performance computing resources and long-term data storage — compute servers for CPU/GPU-heavy workloads, managed storage, and support for running compute jobs and scientific software.

Getting started:

  • Get an account — email rhpc-admin@nki.nl
  • Connect — via terminal, or in your browser with a web service (RStudio/Jupyterhub)

See RHPC computing for more about the facility itself, or the full documentation for everything else — storage, compute jobs, software, and more.

Computational Cancer Biology (B7)

Pages written for the CCB group, but it also contain pointers useful for other research groups, specifically on data management and reproducibility.

Hints

  • To get an account, email rhpc-admin@nki.nl
  • Please do take as much care as possible to cross-reference articles as the resource is growing!
  • Wiki formatting is easy: look at the source of this page for hints.
  • Extra help can be found by clicking the Editing help link at the bottom of the page during editing.
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